BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G04LP1|AL425917
(797 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig792 1577 0.0
>3x_Contig792
Length = 2203
Score = 1577 bits (795), Expect = 0.0
Identities = 796/797 (99%)
Strand = Plus / Plus
Query: 1 atgatggtattattgaattggaccaatggtttgatcctaaggccgagaacagtgttctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1124 atgatggtattattgaattggaccaatggtttgatcctaaggccgagaacagtgttctat 1183
Query: 61 tgatattgaaccaaaggattaagttagatcattcggcatttgaggcattatggaactcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1184 tgatattgaaccaaaggattaagttagatcattcggcatttgaggcattatggaactcat 1243
Query: 121 atacaatcaaaatatgtgctgatggggctgccaatcgattattcgattattatcgtgata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1244 atacaatcaaaatatgtgctgatggggctgccaatcgattattcgattattatcgtgata 1303
Query: 181 gcgatggtaagaggtatcaccccgacgtaattgcaggtgacatggattcaattagggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1304 gcgatggtaagaggtatcaccccgacgtaattgcaggtgacatggattcaattagggaag 1363
Query: 241 acgtacttgaatattatgaagcaatagaaacaaccacagttattaagcaaaacacgcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1364 acgtacttgaatattatgaagcaatagaaacaaccacagttattaagcaaaacacgcaat 1423
Query: 301 attccacagattttaccaagagcgtcaatgttgccactttgttgctattgggcatcgact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1424 attccacagattttaccaagagcgtcaatgttgccactttgttgctattgggcatcgact 1483
Query: 361 tgaatgcagttgaaatcaatgagtatgatggaattcataagctataccaacaggccgata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1484 tgaatgcagttgaaatcaatgagtatgatggaattcataagctataccaacaggccgata 1543
Query: 421 aaagccaattgaaagatataccattacttatcctaaatggtattgatggcagattcgatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1544 aaagccaattgaaagatataccattacttatcctaaatggtattgatggcagattcgatc 1603
Query: 481 ataccatacattccatggtacaattttacgctttacggcgtcaggacccgtactttaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1604 ataccatacattccatggtacaattttacgctttacggcgtcaggacccgtactttaaaa 1663
Query: 541 tgtgttttttaactatgagtgatatgatcatcctcatcccatcctccaaaaaaggatact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1664 tgtgttttttaactatgagtgatatgatcatcctcatcccatcctccaaaaaaggatact 1723
Query: 601 ggttgaaactagacaaagtcaagccattgattgggaactgtggattactgccactagccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1724 ggttgaaactagacaaagtcaagccattgattgggaactgtggattactgccactagccg 1783
Query: 661 ggccaaacataataaccaagactaaaggtttgaaatgggatgttgaagactggcccacaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1784 ggccaaacataataaccaagactaaaggtttgaaatgggatgttgaagactggcccacaa 1843
Query: 721 gtattgaaagtggtaatgtcagcagcagtwatcggttcgtgggagaaaactgcctgattg 780
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1844 gtattgaaagtggtaatgtcagcagcagtaatcggttcgtgggagaaaactgcctgattg 1903
Query: 781 cctgcgaagagtcaatt 797
|||||||||||||||||
Sbjct: 1904 cctgcgaagagtcaatt 1920
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5693
Number of Sequences: 1807
Number of extensions: 5693
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 797
length of database: 10,358,551
effective HSP length: 16
effective length of query: 781
effective length of database: 10,329,639
effective search space: 8067448059
effective search space used: 8067448059
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)